Coverart for item
The Resource Evolutionary genomics : statistical and computational methods, edited by Maria Anisimova

Evolutionary genomics : statistical and computational methods, edited by Maria Anisimova

Label
Evolutionary genomics : statistical and computational methods
Title
Evolutionary genomics
Title remainder
statistical and computational methods
Statement of responsibility
edited by Maria Anisimova
Contributor
Editor
Subject
Genre
Language
eng
Member of
Cataloging source
NLM
Illustrations
illustrations
Index
index present
LC call number
  • QH438.4.S73
  • QH438.4.S73
LC item number
  • E96 2019
  • E94 2019
Literary form
non fiction
Nature of contents
bibliography
NLM call number
  • W1
  • QU 25
NLM item number
ME9616J v.1910 2019
http://library.link/vocab/relatedWorkOrContributorName
Anisimova, Maria
Series statement
  • Methods in molecular biology,
  • Springer protocols
Series volume
1910
http://library.link/vocab/subjectName
  • Genomics
  • Evolutionary genetics
  • Bioinformatics
  • Evolution, Molecular
  • Genome
  • Bioinformatics
  • Evolutionary genetics
  • Genomics
Label
Evolutionary genomics : statistical and computational methods, edited by Maria Anisimova
Instantiates
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
volume
Carrier category code
  • nc
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Part I. Introduction: Bioinformatician's primers. 1. Introduction to genome biology and diversity / Noor Youssef, Aidan Budd, and Joseph P. Bielawski ; 2. Probability, statistics, and computational science / Niko Beerenwinkel and Juliane Siebourg ; 3. A not-so-long introduction to computational molecular evolution / Stéphane Aris-Brosou and Nicolas Rodrigue -- Part II. Genomic alignment and homology inference. 4. Whole-genome alignment / Colin N. Dewey ; 5. Inferring orthology and paralogy / Adrian M. Altenhoff, Natasha M. Glover, and Christophe Dessimoz ; 6. Transposable elements : classification, identification, and their use as a tool for comparative genomics / Wojciech Makałowski, Valer Gotea, Amit Pande, and Izabela Makałowska -- Part III. Phylogenomics and genome evolution. 7. Modern phylogenomics : building phylogenetic trees using the multispecies coalescent model / Liang Liu, Christian Anderson, Dennis Pearl, and Scott V. Edwards ; 8. Genome-wide comparative analysis of phylogenetic trees : the prokaryotic forest of life / Pere Puigbò, Yuri I. Wolf, and Eugene V. Koonin ; 9. The methodology behind network thinking : graphs to analyze microbial complexity and evolution / Andrew K. Watson, Romain Lannes, Jananan S. Pathmanathan, Raphaël Méheust, Slim Karkar, Philippe Colson, Eduardo Corel, Philippe Lopez, and Eric Bapteste ; 10. Bayesian molecular clock dating using genome-scale datasets / Mariodos Reis and Ziheng Yang ; 11. Genome evolution in outcrossing vs. selfing vs. asexual species / Sylvain Glémin, Clémentine M. François, and Nicolas Galtier -- Part IV. Natural selection and innovation in genomic sequences. 12. Selection acting on genomes / Carolin Kosiol and Maria Anisimova ; 13. Looking for Darwin in genomic sequences : validity and success depends on the relationship between model and data / Christopher T. Jones, Edward Susko, and Joseph P. Bielawski ; 14. Evolution of viral genomes : interplay between selection, recombination, and other forces / Stephanie J. Spielman, Steven Weaver, Stephen D. Shank, Brittany Rife Magalis, Michael Li, and Sergei L. Kosakovsky Pond ; 15. Evolution of protein domain architectures / Sofia K. Forslund, Mateusz Kaduk, and Erik L.L. Sonnhammer ; 16. New insights on the evolution of genome content : population dynamics of transposable elements in flies and humans / Lain Guio and Josefa González -- Part V. Population genomics and omics in light of disease and evolution. 17. Association mapping and disease : evolutionary perspectives / Søren Besenbacher, Thomas Mailund, Bjarni J. Vilhjálmsson, and Mikkel H. Schierup ; 18. Ancestral population genomics / Julien Y. Dutheil and Asger Hobolth ; 19. Introduction to the analysis of environmental sequences : metagenomics with MEGAN / Caner Bağcı, Sina Beier, Anna Górska, and Daniel H. Huson ; 20. Multiple data analyses and statistical approaches for analyzing data from metagenomic studies and clinical trials / Suparna Mitra ; 21. Systems genetics for evolutionary studies / Pjotr Prins, Geert Smant, Danny Arends, Megan K. Mulligan, Rob W. Williams, and Ritsert C. Jansen -- Part VI. Handling genomic data : resources and computation. 22. Semantic integration and enrichment of heterogeneous biological databases / Ana Claudia Sima, Kurt Stockinger, Tarcisio Mendes de Farias, and Manuel Gil ; 23. High-performance computing in Bayesian phylogenetics and phylodynamics using BEAGLE / Guy Baele, Daniel L. Ayres, Andrew Rambaut, Marc A. Suchard, and Philippe Lemey ; 24. Scalable workflows and reproducible data analysis for genomics / Francesco Strozzi, Roel Janssen, Ricardo Wurmus, Michael R. Crusoe, George Githinji, Paolo Di Tommaso, Dominique Belhachemi, Steffen Möller, Geert Smant, Joepde Ligt, and Pjotr Prins ; 25. Sharing programming resources between Bio* projects / Raoul J.P. Bonnal, Andrew Yates, Naohisa Goto, Laurent Gautier, Scooter Willis, Christopher Fields, Toshiaki Katayama, and Pjotr Prins
Control code
1059308722
Dimensions
27 cm.
Edition
Second edition.
Extent
xvii, 780 pages
Isbn
9781493990733
Media category
unmediated
Media MARC source
rdamedia
Media type code
  • n
Other physical details
illustrations (some color)
System control number
(OCoLC)1059308722
Label
Evolutionary genomics : statistical and computational methods, edited by Maria Anisimova
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
volume
Carrier category code
  • nc
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Part I. Introduction: Bioinformatician's primers. 1. Introduction to genome biology and diversity / Noor Youssef, Aidan Budd, and Joseph P. Bielawski ; 2. Probability, statistics, and computational science / Niko Beerenwinkel and Juliane Siebourg ; 3. A not-so-long introduction to computational molecular evolution / Stéphane Aris-Brosou and Nicolas Rodrigue -- Part II. Genomic alignment and homology inference. 4. Whole-genome alignment / Colin N. Dewey ; 5. Inferring orthology and paralogy / Adrian M. Altenhoff, Natasha M. Glover, and Christophe Dessimoz ; 6. Transposable elements : classification, identification, and their use as a tool for comparative genomics / Wojciech Makałowski, Valer Gotea, Amit Pande, and Izabela Makałowska -- Part III. Phylogenomics and genome evolution. 7. Modern phylogenomics : building phylogenetic trees using the multispecies coalescent model / Liang Liu, Christian Anderson, Dennis Pearl, and Scott V. Edwards ; 8. Genome-wide comparative analysis of phylogenetic trees : the prokaryotic forest of life / Pere Puigbò, Yuri I. Wolf, and Eugene V. Koonin ; 9. The methodology behind network thinking : graphs to analyze microbial complexity and evolution / Andrew K. Watson, Romain Lannes, Jananan S. Pathmanathan, Raphaël Méheust, Slim Karkar, Philippe Colson, Eduardo Corel, Philippe Lopez, and Eric Bapteste ; 10. Bayesian molecular clock dating using genome-scale datasets / Mariodos Reis and Ziheng Yang ; 11. Genome evolution in outcrossing vs. selfing vs. asexual species / Sylvain Glémin, Clémentine M. François, and Nicolas Galtier -- Part IV. Natural selection and innovation in genomic sequences. 12. Selection acting on genomes / Carolin Kosiol and Maria Anisimova ; 13. Looking for Darwin in genomic sequences : validity and success depends on the relationship between model and data / Christopher T. Jones, Edward Susko, and Joseph P. Bielawski ; 14. Evolution of viral genomes : interplay between selection, recombination, and other forces / Stephanie J. Spielman, Steven Weaver, Stephen D. Shank, Brittany Rife Magalis, Michael Li, and Sergei L. Kosakovsky Pond ; 15. Evolution of protein domain architectures / Sofia K. Forslund, Mateusz Kaduk, and Erik L.L. Sonnhammer ; 16. New insights on the evolution of genome content : population dynamics of transposable elements in flies and humans / Lain Guio and Josefa González -- Part V. Population genomics and omics in light of disease and evolution. 17. Association mapping and disease : evolutionary perspectives / Søren Besenbacher, Thomas Mailund, Bjarni J. Vilhjálmsson, and Mikkel H. Schierup ; 18. Ancestral population genomics / Julien Y. Dutheil and Asger Hobolth ; 19. Introduction to the analysis of environmental sequences : metagenomics with MEGAN / Caner Bağcı, Sina Beier, Anna Górska, and Daniel H. Huson ; 20. Multiple data analyses and statistical approaches for analyzing data from metagenomic studies and clinical trials / Suparna Mitra ; 21. Systems genetics for evolutionary studies / Pjotr Prins, Geert Smant, Danny Arends, Megan K. Mulligan, Rob W. Williams, and Ritsert C. Jansen -- Part VI. Handling genomic data : resources and computation. 22. Semantic integration and enrichment of heterogeneous biological databases / Ana Claudia Sima, Kurt Stockinger, Tarcisio Mendes de Farias, and Manuel Gil ; 23. High-performance computing in Bayesian phylogenetics and phylodynamics using BEAGLE / Guy Baele, Daniel L. Ayres, Andrew Rambaut, Marc A. Suchard, and Philippe Lemey ; 24. Scalable workflows and reproducible data analysis for genomics / Francesco Strozzi, Roel Janssen, Ricardo Wurmus, Michael R. Crusoe, George Githinji, Paolo Di Tommaso, Dominique Belhachemi, Steffen Möller, Geert Smant, Joepde Ligt, and Pjotr Prins ; 25. Sharing programming resources between Bio* projects / Raoul J.P. Bonnal, Andrew Yates, Naohisa Goto, Laurent Gautier, Scooter Willis, Christopher Fields, Toshiaki Katayama, and Pjotr Prins
Control code
1059308722
Dimensions
27 cm.
Edition
Second edition.
Extent
xvii, 780 pages
Isbn
9781493990733
Media category
unmediated
Media MARC source
rdamedia
Media type code
  • n
Other physical details
illustrations (some color)
System control number
(OCoLC)1059308722

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      38.944491 -92.326012
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