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The Resource Fungal genomics : methods and protocols, edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev

Fungal genomics : methods and protocols, edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev

Label
Fungal genomics : methods and protocols
Title
Fungal genomics
Title remainder
methods and protocols
Statement of responsibility
edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev
Creator
Contributor
Editor
Subject
Genre
Language
eng
Member of
Has edition
Cataloging source
NLM
http://bibfra.me/vocab/lite/collectionName
Fungal genomics (2011)
Illustrations
illustrations
Index
index present
LC call number
QK602
LC item number
.F86 2018
Literary form
non fiction
Nature of contents
bibliography
NLM call number
  • W1
  • QK 602
NLM item number
ME9616J v.1775 2018
http://library.link/vocab/relatedWorkOrContributorName
  • Vries, R. de
  • Tsang, Adrian
  • Grigoriev, Igor V.
Series statement
  • Methods in molecular biology,
  • Springer protocols
Series volume
1775
http://library.link/vocab/subjectName
  • Fungi
  • Genomics
  • Mycology
  • Fungi
  • Genome, Fungal
  • Fungi
  • Mycology
Label
Fungal genomics : methods and protocols, edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev
Instantiates
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
volume
Carrier category code
  • nc
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • Methods for genomic characterization and maintenance anaerobic fungi
  • Xuefeng Peng, Candice L. Swift, Michael K. Theodorou, and Michelle A. O'Malley
  • Efficient extraction method for high quality fungal RNA from complex lignocellulosic substrates
  • Miia R. Mäkelä and Kristiina Hildén
  • Isolation of high quality RNA for metatranscriptomic analysis of lignocellulose digestion in the rumen
  • R. J. Gruninger, R. J. Forster, and T. A. McAllister
  • Fungal transcriptomics
  • Vasanth R. Singan, Rita C. Kuo, and Cindy Chen
  • Mass spectrometry-based proteomics
  • Marcos Rafael Di Falco
  • Introduction : overview of fungal genomics
  • Mass spectrometry-based metabolomics
  • Young-Mo Kim and Heino M. Heyman
  • Genome editing : CRISPR-Cas9
  • Jakob B. Hoof, Christina S. Nødvig, and Uffe H. Mortensen
  • Evolutionary adaptation togenerate mutants
  • Ronald P. de Vries, Ronnie Lubbers, Aleksandrina Patyshakuliyeva, Ad Wiebenga, and Isabelle Benoit-Gelber
  • Genome assembly
  • Alicia Clum
  • Fungal epigenomics : detection and analysis
  • Stephen J. Mondo, Rita C. Kuo, and Vasanth R. Singan
  • Ronald P. de Vries, Igor V. Grigoriev, and Adrian Tsang
  • Fungal genome annotation
  • Sajeet Haridas, Asaf Salamov, and Igor V. Grigoriev
  • Manual gene curation and functional annotation
  • Erin McDonnell, Kimchi Strasser, and Adrian Tsang
  • Evaluating programs for predicting genes and transcripts with RNA-Seq support in fungal genomes
  • Ian Reid
  • Genomic sequence variation analysis by resequencing
  • Joel Martin, Wendy Schackwitz, and Anna Lipzen
  • ChIP-Seq analysis in Neurospora crassa
  • Aileen R. Ferraro and Zachary A. Lewis
  • Fungal genomic DNA extraction methods for rapid genotyping and genome sequencing
  • Fungal phylogenomics
  • Robert Riley and Laszlo Nagy
  • Phylogenetic analysis of protein family
  • Letian Song, Sherry Wu, and Adrian Tsang
  • Parasexual crossings for bulk segregant analysis in Aspergillus niger to facilitate mutant identification via whole genome sequencing
  • Mark Arentshorst and Arthur F. J. Ram
  • Annie Bellemare, Tricia John, and Sandrine Marqueteau
  • Purification of fungal high molecular weight genomic DNA from environmental samples
  • Laure Fauchery, Stéphane Uroz, Marc Buée, and Annegret Kohler
  • Genome sequencing
  • Yuko Yoshinaga, Christopher Daum, Guifen He, and Ronan O'Malley
Control code
1020609565
Dimensions
27 cm.
Edition
Second edition.
Extent
xi, 291 pages
Isbn
9781493978038
Lccn
2018941834
Media category
unmediated
Media MARC source
rdamedia
Media type code
  • n
Other physical details
illustrations (chiefly color)
System control number
(OCoLC)1020609565
Label
Fungal genomics : methods and protocols, edited by Ronald P. de Vries, Adrian Tsang, Igor V. Grigoriev
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
volume
Carrier category code
  • nc
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • Methods for genomic characterization and maintenance anaerobic fungi
  • Xuefeng Peng, Candice L. Swift, Michael K. Theodorou, and Michelle A. O'Malley
  • Efficient extraction method for high quality fungal RNA from complex lignocellulosic substrates
  • Miia R. Mäkelä and Kristiina Hildén
  • Isolation of high quality RNA for metatranscriptomic analysis of lignocellulose digestion in the rumen
  • R. J. Gruninger, R. J. Forster, and T. A. McAllister
  • Fungal transcriptomics
  • Vasanth R. Singan, Rita C. Kuo, and Cindy Chen
  • Mass spectrometry-based proteomics
  • Marcos Rafael Di Falco
  • Introduction : overview of fungal genomics
  • Mass spectrometry-based metabolomics
  • Young-Mo Kim and Heino M. Heyman
  • Genome editing : CRISPR-Cas9
  • Jakob B. Hoof, Christina S. Nødvig, and Uffe H. Mortensen
  • Evolutionary adaptation togenerate mutants
  • Ronald P. de Vries, Ronnie Lubbers, Aleksandrina Patyshakuliyeva, Ad Wiebenga, and Isabelle Benoit-Gelber
  • Genome assembly
  • Alicia Clum
  • Fungal epigenomics : detection and analysis
  • Stephen J. Mondo, Rita C. Kuo, and Vasanth R. Singan
  • Ronald P. de Vries, Igor V. Grigoriev, and Adrian Tsang
  • Fungal genome annotation
  • Sajeet Haridas, Asaf Salamov, and Igor V. Grigoriev
  • Manual gene curation and functional annotation
  • Erin McDonnell, Kimchi Strasser, and Adrian Tsang
  • Evaluating programs for predicting genes and transcripts with RNA-Seq support in fungal genomes
  • Ian Reid
  • Genomic sequence variation analysis by resequencing
  • Joel Martin, Wendy Schackwitz, and Anna Lipzen
  • ChIP-Seq analysis in Neurospora crassa
  • Aileen R. Ferraro and Zachary A. Lewis
  • Fungal genomic DNA extraction methods for rapid genotyping and genome sequencing
  • Fungal phylogenomics
  • Robert Riley and Laszlo Nagy
  • Phylogenetic analysis of protein family
  • Letian Song, Sherry Wu, and Adrian Tsang
  • Parasexual crossings for bulk segregant analysis in Aspergillus niger to facilitate mutant identification via whole genome sequencing
  • Mark Arentshorst and Arthur F. J. Ram
  • Annie Bellemare, Tricia John, and Sandrine Marqueteau
  • Purification of fungal high molecular weight genomic DNA from environmental samples
  • Laure Fauchery, Stéphane Uroz, Marc Buée, and Annegret Kohler
  • Genome sequencing
  • Yuko Yoshinaga, Christopher Daum, Guifen He, and Ronan O'Malley
Control code
1020609565
Dimensions
27 cm.
Edition
Second edition.
Extent
xi, 291 pages
Isbn
9781493978038
Lccn
2018941834
Media category
unmediated
Media MARC source
rdamedia
Media type code
  • n
Other physical details
illustrations (chiefly color)
System control number
(OCoLC)1020609565

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