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The Resource Mass spectrometry of proteins and peptides : methods and protocols

Mass spectrometry of proteins and peptides : methods and protocols

Contributor
Summary
When the last edition of this book was published in 2000, the field of proteomics was in its infancy. Now in its adolescence, proteomics is fundamentally transforming biological and medical research. Much of this transformation can be attributed to technological advancements, particularly in mass spectrometry. As a result of these rapid developments that have led to expanded areas of research and innovative applications, an update to Mass Spectrometry of Proteins and Peptides is not only worthwhile, but arguably mandatory. Spanning fields from microbial forensics and clinical applications to protein structure, dynamics and function, the following chapters written by leading experts serve as a forum for presenting some of the latest revolutionizing methods for mass spectrometry-based characterization of proteins and peptides. Staying faithful to the spirit of the Methods in Molecular Biology series, all chapters are written in the same format, whereby each chapter opens with a basic description of the method, followed by a description of the protocol and then practical step-by-step instructions to ensure experimental success. Mass Spectrometry of Proteins and Peptides: Methods and Protocols, Second Edition is a valuable resource for novice and seasoned practitioners in the fields of biochemistry, molecular biology, clinical chemistry, immunology, genetic, microbiology and toxicology
Language
eng
Work
Publication
Edition
  • 2nd ed. /
  • edited by Mary S. Lipton and Ljiljana Paša-Tolić.
Extent
1 online resource (xiv, 470 pages)
Note
Previous ed. published under title: Mass spectrometry of protein and peptides
Contents
  • The use of difference in-gel electrophoresis for quantitation of protein expression
  • Rajat Sapra
  • Liquid-chromatography-mass spectrometry of thylakoid membrane proteins
  • Christian G. Huber [and others]
  • High accuracy mass spectrometry in large-scale analysis of protein phosphorylation
  • Jesper V. Olsen and Boris Macek
  • Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra
  • Amy M. Nichols and Forest M. White
  • Assigning glycosylation sites and microheterogeneities in glycoproteins by liquid chromatography/tandem mass spectrometry / Yehia Mechref, Milan Madera, and Milos V. Novotny
  • Structure analysis of N -glycoproteins
  • Generation and analysis of multidimensional protein identification technology datasets
  • Stefanie Henning, Jasna Peter-Katalinicʹ, and Gottfried Pohlentz
  • Capillary zone electrophoresis-mass spectrometry for the characterization of isoforms of intact glycoproteins
  • Christian Neusü€, and Matthias Pelzing
  • Top-down proteomics on a high-field fourier transform ion cyclotron resonance mass spectrometer
  • Séverine A. Ouvry-Patat [and others]
  • Capillary isoelectric focusing/reversed phase liquid chromatography/mass spectrometry
  • Cheng S. Lee and Brian M. Balgley
  • Integrating accelerated tryptic digestion into proteomics workflows
  • Gordon W. Slysz and David C. Schriemer
  • Hydrogen/deuterium exchange mass spectrometry
  • Selene K. Swanson, Laurence Florens, and Michael P. Washburn
  • Xuguang Yan and Claudia S. Maier
  • Mass spectrometry detection and characterization of noncovalent protein complexes
  • Sheng Yin and Joseph A. Loos
  • Chemical cross-linking for protein-protein interaction studies
  • Xiaoting Tang and James E. Bruce
  • Tissue analysis with high-resolution imaging mass spectrometry
  • A.F. Maarten Altelaar and Ron M.A. Heeren
  • Proteomic global profiling for cancer biomarker discovery
  • Vitor Faca, Hong Wang, and Samir Hanash
  • Analysis of protein glycosylation and phosphorylation using liquid phase separation, protein microarray technology, and mass spectrometry
  • Quantitative peptide and protein profiling by mass spectrometry
  • Jia Zhao [and others]
  • Transthyretin mass determination for detection of transthyretin familial amyloid
  • John F. O'Brien and H. Robert Bergen III
  • Characterization of microorganisms by MALDI mass spectrometry
  • Catherine E. Petersen, Nancy B. Valentine, and Karen L. Wahl
  • Mass spectrometric characterization of neuropeptides
  • Stephanie S. DeKeyser, James A. Dowell, and Lingjun Li
  • Peptide and protein ion/ion reactions in electrodynamic ion traps: tools and methods
  • Scott A. McLuckey
  • Electron capture dissociation LC/MS/MS for bottom-up proteomics
  • Alexander Schmidt, Birgit Bisle, and Thomas Kislinger
  • Roman A. Zubarev
  • Two-dimensional ion mobility analyses of proteins and peptides
  • Alexandre A. Shvartsburg, Keqi Tang, and Richard D. Smith
  • Proteomics for validation of automated gene model predictions
  • Kemin Zhou [and others]
  • Support vector machines for improved peptide identification from tandem mass spectrometry database search
  • Bobbie-Jo M. Webb-Robertson
  • Label-free relative quantitation of prokaryotic proteomes using the accurate mass and time tag approach
  • Kim K. Hixson
  • Classical proteomics: two-dimensional electrophoresis/MALDI mass spectrometry
  • Ursula Zimny-Arndt [and others]
Isbn
9781597454933
Instance
Label
Mass spectrometry of proteins and peptides : methods and protocols
Title
Mass spectrometry of proteins and peptides
Title remainder
methods and protocols
Contributor
Subject
Genre
Language
eng
Summary
When the last edition of this book was published in 2000, the field of proteomics was in its infancy. Now in its adolescence, proteomics is fundamentally transforming biological and medical research. Much of this transformation can be attributed to technological advancements, particularly in mass spectrometry. As a result of these rapid developments that have led to expanded areas of research and innovative applications, an update to Mass Spectrometry of Proteins and Peptides is not only worthwhile, but arguably mandatory. Spanning fields from microbial forensics and clinical applications to protein structure, dynamics and function, the following chapters written by leading experts serve as a forum for presenting some of the latest revolutionizing methods for mass spectrometry-based characterization of proteins and peptides. Staying faithful to the spirit of the Methods in Molecular Biology series, all chapters are written in the same format, whereby each chapter opens with a basic description of the method, followed by a description of the protocol and then practical step-by-step instructions to ensure experimental success. Mass Spectrometry of Proteins and Peptides: Methods and Protocols, Second Edition is a valuable resource for novice and seasoned practitioners in the fields of biochemistry, molecular biology, clinical chemistry, immunology, genetic, microbiology and toxicology
Member of
Cataloging source
COO
http://bibfra.me/vocab/lite/collectionName
Mass spectrometry of protein and peptides
Dewey number
572/.633
Illustrations
illustrations
Index
index present
Language note
English
LC call number
QP551
LC item number
.M33 2009
Literary form
non fiction
NAL call number
QP551
NAL item number
.M334 2009
Nature of contents
  • dictionaries
  • bibliography
NLM call number
  • W1
  • QU 25
NLM item number
  • ME9616J v.492 2009
  • M414 2009
http://library.link/vocab/relatedWorkOrContributorName
  • Lipton, Mary S
  • Paša-Tolić, Ljiljana
Series statement
  • Methods in molecular biology,
  • Springer protocols
Series volume
492
http://library.link/vocab/subjectName
  • Proteins
  • Peptides
  • Amino acid sequence
  • Mass spectrometry
  • Proteins
  • Mass Spectrometry
  • Peptides
  • Peptides
  • Proteins
  • Amino acid sequence
  • Mass spectrometry
  • Protéines
  • Spectroscopie de masse
  • Mass Spectrometry
  • Amino acid sequence
  • Mass spectrometry
  • Peptides
  • Proteins
  • Protéines
  • Spectroscopie de masse
Label
Mass spectrometry of proteins and peptides : methods and protocols
Instantiates
Publication
Note
Previous ed. published under title: Mass spectrometry of protein and peptides
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • The use of difference in-gel electrophoresis for quantitation of protein expression
  • Rajat Sapra
  • Liquid-chromatography-mass spectrometry of thylakoid membrane proteins
  • Christian G. Huber [and others]
  • High accuracy mass spectrometry in large-scale analysis of protein phosphorylation
  • Jesper V. Olsen and Boris Macek
  • Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra
  • Amy M. Nichols and Forest M. White
  • Assigning glycosylation sites and microheterogeneities in glycoproteins by liquid chromatography/tandem mass spectrometry / Yehia Mechref, Milan Madera, and Milos V. Novotny
  • Structure analysis of N -glycoproteins
  • Generation and analysis of multidimensional protein identification technology datasets
  • Stefanie Henning, Jasna Peter-Katalinicʹ, and Gottfried Pohlentz
  • Capillary zone electrophoresis-mass spectrometry for the characterization of isoforms of intact glycoproteins
  • Christian Neusü€, and Matthias Pelzing
  • Top-down proteomics on a high-field fourier transform ion cyclotron resonance mass spectrometer
  • Séverine A. Ouvry-Patat [and others]
  • Capillary isoelectric focusing/reversed phase liquid chromatography/mass spectrometry
  • Cheng S. Lee and Brian M. Balgley
  • Integrating accelerated tryptic digestion into proteomics workflows
  • Gordon W. Slysz and David C. Schriemer
  • Hydrogen/deuterium exchange mass spectrometry
  • Selene K. Swanson, Laurence Florens, and Michael P. Washburn
  • Xuguang Yan and Claudia S. Maier
  • Mass spectrometry detection and characterization of noncovalent protein complexes
  • Sheng Yin and Joseph A. Loos
  • Chemical cross-linking for protein-protein interaction studies
  • Xiaoting Tang and James E. Bruce
  • Tissue analysis with high-resolution imaging mass spectrometry
  • A.F. Maarten Altelaar and Ron M.A. Heeren
  • Proteomic global profiling for cancer biomarker discovery
  • Vitor Faca, Hong Wang, and Samir Hanash
  • Analysis of protein glycosylation and phosphorylation using liquid phase separation, protein microarray technology, and mass spectrometry
  • Quantitative peptide and protein profiling by mass spectrometry
  • Jia Zhao [and others]
  • Transthyretin mass determination for detection of transthyretin familial amyloid
  • John F. O'Brien and H. Robert Bergen III
  • Characterization of microorganisms by MALDI mass spectrometry
  • Catherine E. Petersen, Nancy B. Valentine, and Karen L. Wahl
  • Mass spectrometric characterization of neuropeptides
  • Stephanie S. DeKeyser, James A. Dowell, and Lingjun Li
  • Peptide and protein ion/ion reactions in electrodynamic ion traps: tools and methods
  • Scott A. McLuckey
  • Electron capture dissociation LC/MS/MS for bottom-up proteomics
  • Alexander Schmidt, Birgit Bisle, and Thomas Kislinger
  • Roman A. Zubarev
  • Two-dimensional ion mobility analyses of proteins and peptides
  • Alexandre A. Shvartsburg, Keqi Tang, and Richard D. Smith
  • Proteomics for validation of automated gene model predictions
  • Kemin Zhou [and others]
  • Support vector machines for improved peptide identification from tandem mass spectrometry database search
  • Bobbie-Jo M. Webb-Robertson
  • Label-free relative quantitation of prokaryotic proteomes using the accurate mass and time tag approach
  • Kim K. Hixson
  • Classical proteomics: two-dimensional electrophoresis/MALDI mass spectrometry
  • Ursula Zimny-Arndt [and others]
Control code
311616030
Dimensions
unknown
Edition
  • 2nd ed. /
  • edited by Mary S. Lipton and Ljiljana Paša-Tolić.
Extent
1 online resource (xiv, 470 pages)
Form of item
online
Isbn
9781597454933
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-1-59745-493-3
Other physical details
illustrations.
Specific material designation
remote
System control number
(OCoLC)311616030
Label
Mass spectrometry of proteins and peptides : methods and protocols
Publication
Note
Previous ed. published under title: Mass spectrometry of protein and peptides
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • The use of difference in-gel electrophoresis for quantitation of protein expression
  • Rajat Sapra
  • Liquid-chromatography-mass spectrometry of thylakoid membrane proteins
  • Christian G. Huber [and others]
  • High accuracy mass spectrometry in large-scale analysis of protein phosphorylation
  • Jesper V. Olsen and Boris Macek
  • Manual validation of peptide sequence and sites of tyrosine phosphorylation from MS/MS spectra
  • Amy M. Nichols and Forest M. White
  • Assigning glycosylation sites and microheterogeneities in glycoproteins by liquid chromatography/tandem mass spectrometry / Yehia Mechref, Milan Madera, and Milos V. Novotny
  • Structure analysis of N -glycoproteins
  • Generation and analysis of multidimensional protein identification technology datasets
  • Stefanie Henning, Jasna Peter-Katalinicʹ, and Gottfried Pohlentz
  • Capillary zone electrophoresis-mass spectrometry for the characterization of isoforms of intact glycoproteins
  • Christian Neusü€, and Matthias Pelzing
  • Top-down proteomics on a high-field fourier transform ion cyclotron resonance mass spectrometer
  • Séverine A. Ouvry-Patat [and others]
  • Capillary isoelectric focusing/reversed phase liquid chromatography/mass spectrometry
  • Cheng S. Lee and Brian M. Balgley
  • Integrating accelerated tryptic digestion into proteomics workflows
  • Gordon W. Slysz and David C. Schriemer
  • Hydrogen/deuterium exchange mass spectrometry
  • Selene K. Swanson, Laurence Florens, and Michael P. Washburn
  • Xuguang Yan and Claudia S. Maier
  • Mass spectrometry detection and characterization of noncovalent protein complexes
  • Sheng Yin and Joseph A. Loos
  • Chemical cross-linking for protein-protein interaction studies
  • Xiaoting Tang and James E. Bruce
  • Tissue analysis with high-resolution imaging mass spectrometry
  • A.F. Maarten Altelaar and Ron M.A. Heeren
  • Proteomic global profiling for cancer biomarker discovery
  • Vitor Faca, Hong Wang, and Samir Hanash
  • Analysis of protein glycosylation and phosphorylation using liquid phase separation, protein microarray technology, and mass spectrometry
  • Quantitative peptide and protein profiling by mass spectrometry
  • Jia Zhao [and others]
  • Transthyretin mass determination for detection of transthyretin familial amyloid
  • John F. O'Brien and H. Robert Bergen III
  • Characterization of microorganisms by MALDI mass spectrometry
  • Catherine E. Petersen, Nancy B. Valentine, and Karen L. Wahl
  • Mass spectrometric characterization of neuropeptides
  • Stephanie S. DeKeyser, James A. Dowell, and Lingjun Li
  • Peptide and protein ion/ion reactions in electrodynamic ion traps: tools and methods
  • Scott A. McLuckey
  • Electron capture dissociation LC/MS/MS for bottom-up proteomics
  • Alexander Schmidt, Birgit Bisle, and Thomas Kislinger
  • Roman A. Zubarev
  • Two-dimensional ion mobility analyses of proteins and peptides
  • Alexandre A. Shvartsburg, Keqi Tang, and Richard D. Smith
  • Proteomics for validation of automated gene model predictions
  • Kemin Zhou [and others]
  • Support vector machines for improved peptide identification from tandem mass spectrometry database search
  • Bobbie-Jo M. Webb-Robertson
  • Label-free relative quantitation of prokaryotic proteomes using the accurate mass and time tag approach
  • Kim K. Hixson
  • Classical proteomics: two-dimensional electrophoresis/MALDI mass spectrometry
  • Ursula Zimny-Arndt [and others]
Control code
311616030
Dimensions
unknown
Edition
  • 2nd ed. /
  • edited by Mary S. Lipton and Ljiljana Paša-Tolić.
Extent
1 online resource (xiv, 470 pages)
Form of item
online
Isbn
9781597454933
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-1-59745-493-3
Other physical details
illustrations.
Specific material designation
remote
System control number
(OCoLC)311616030

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