Coverart for item
The Resource Microbial systems biology : methods and protocols, edited by Ali Navid, (electronic resource)

Microbial systems biology : methods and protocols, edited by Ali Navid, (electronic resource)

Label
Microbial systems biology : methods and protocols
Title
Microbial systems biology
Title remainder
methods and protocols
Statement of responsibility
edited by Ali Navid
Contributor
Subject
Language
eng
Cataloging source
BTCTA
Dewey number
570.1/13
LC call number
QH324.2
LC item number
.M52 2012
http://library.link/vocab/relatedWorkOrContributorName
Navid, Ali
Series statement
  • Springer protocols
  • Methods in molecular biology,
Series volume
881
http://library.link/vocab/subjectName
  • Systems biology
  • Microbiology
Label
Microbial systems biology : methods and protocols, edited by Ali Navid, (electronic resource)
Instantiates
Publication
Bibliography note
Includes bibliographical references and index
Contents
Pt. I. Sample preparation and identification. - 1. Flow cytometry in environmental microbiology: a rapid approach for the isolation of single cells for advanced molecular biology analysis / Belinda C. Ferrari, Tristrom J. Winsley, Peter L. Bergquist, and Josie Van Dorst ; 2. Pressure cycling technology in systems biology / Bradford S. Powell, Alexander V. Lazarev, Greta Carlson, Alexander R. Ivanov, and David A. Rozak ; 3. Targeted isolation of proteins from natural microbial communities living in an extreme environment / Steven W. Singer ; 4. Bacterial identification and subtyping using DNA microarray and DNA sequencing / Sufian F. Al-Khaldi, Magdi M. Mossoba, Marc M. Allard, E. Kurt Lienau, and Eric D. Brown -- Pt. II. Experimental genomic analysis. - 5. Genetic manipulation of the obligate chemolithoautotrophic bacterium Thiobacillus denitrificans / Harry R. Beller, Tina C. Legler, and Stacie R. Kane ; 6. Genome-wide mapping of the binding sites of proteins that interact with DNA / Stephen Spiro -- Pt. III. Protein and lipid analysis. - 7. Microbial proteomics using mass spectrometry / Harry B. Hines ; 8. Fourier transform infrared spectroscopy for molecular analysis of microbial cells / Jesús J. Ojeda and Maria Dittrich -- Pt. IV. Metabolomic analyses. - 9. Mass spectrometery-based microbial metabolomics / Edward E.K. Baidoo, Peter I. Benke, and Jay D. Keasling ; 10. Fast sampling of the cellular metabolome / Walter M. Van Gulik, Andre B. Canelas, Hilal Taymaz-Nikeel, Rutger D. Douma, Lodewijk P. de Jonge, and Joseph J. Heijnen -- Pt. V. - 11. Metabolic pathway determination and flux analysis in nonmodel microorganisms through 13C-isotope labeling / Xueyang Feng, Wei-Qin Zhuang, Peter Colletti, and Yinjie J. Tang ; 12. Biolog phenotype microarrays / April Shea, Mark Wolcott, Simon Daefler, and David A. Rozak ; 13. NanoSIP: nanoSIMS applications for microbial biology / Jennifer Pett-Ridge and Peter K. Weber -- Pt. VI. Kinetic modeling of cellular processes - 14. Electrophysiological-metabolic modeling of microbes: applications in fuel cells and environment analysis / Max Fontus and Peter Ortoleva ; 15. Simulating microbial systems: addressing model uncertainty/incompleteness via multiscale and entropy methods / A. Singharoy, H. Joshi, S.Cheluvaraja, Y. Miao, D. Brown, and P. Ortoleva -- Pt. VII. - 16. Bacterial genome annotation / Nicholas Beckloff, Shawn Starkenburg, Tracey Freitas, and Patrick Chain ; 17. LeishCyc: a guide to building a metabolic pathway database and visualization of metabolomic data / Eleanor C. Saunders, James I. MacRae, Thomas Naderer, Milica Ng, Malcolm J. McConville, and Vladimir A. Likić ; 18. Development of constraint-based system-level models of microbial metabolism / Ali Navid ; 19. Complex network analysis in microbial systems: theory and examples / Zahra Zavareh and Eivind Almaas ; 20. Modeling a minimal cell / Michael L. Shuler, Patricia Foley, and Jordan Atlas
Control code
OCM1bookssj0000697549
Dimensions
26 cm.
Dimensions
unknown
Extent
xii, 615 pages
Isbn
9781617798269
Isbn Type
(acid-free paper)
Lccn
2012937211
Other physical details
illustrations (some color)
Specific material designation
remote
System control number
(WaSeSS)ssj0000697549
Label
Microbial systems biology : methods and protocols, edited by Ali Navid, (electronic resource)
Publication
Bibliography note
Includes bibliographical references and index
Contents
Pt. I. Sample preparation and identification. - 1. Flow cytometry in environmental microbiology: a rapid approach for the isolation of single cells for advanced molecular biology analysis / Belinda C. Ferrari, Tristrom J. Winsley, Peter L. Bergquist, and Josie Van Dorst ; 2. Pressure cycling technology in systems biology / Bradford S. Powell, Alexander V. Lazarev, Greta Carlson, Alexander R. Ivanov, and David A. Rozak ; 3. Targeted isolation of proteins from natural microbial communities living in an extreme environment / Steven W. Singer ; 4. Bacterial identification and subtyping using DNA microarray and DNA sequencing / Sufian F. Al-Khaldi, Magdi M. Mossoba, Marc M. Allard, E. Kurt Lienau, and Eric D. Brown -- Pt. II. Experimental genomic analysis. - 5. Genetic manipulation of the obligate chemolithoautotrophic bacterium Thiobacillus denitrificans / Harry R. Beller, Tina C. Legler, and Stacie R. Kane ; 6. Genome-wide mapping of the binding sites of proteins that interact with DNA / Stephen Spiro -- Pt. III. Protein and lipid analysis. - 7. Microbial proteomics using mass spectrometry / Harry B. Hines ; 8. Fourier transform infrared spectroscopy for molecular analysis of microbial cells / Jesús J. Ojeda and Maria Dittrich -- Pt. IV. Metabolomic analyses. - 9. Mass spectrometery-based microbial metabolomics / Edward E.K. Baidoo, Peter I. Benke, and Jay D. Keasling ; 10. Fast sampling of the cellular metabolome / Walter M. Van Gulik, Andre B. Canelas, Hilal Taymaz-Nikeel, Rutger D. Douma, Lodewijk P. de Jonge, and Joseph J. Heijnen -- Pt. V. - 11. Metabolic pathway determination and flux analysis in nonmodel microorganisms through 13C-isotope labeling / Xueyang Feng, Wei-Qin Zhuang, Peter Colletti, and Yinjie J. Tang ; 12. Biolog phenotype microarrays / April Shea, Mark Wolcott, Simon Daefler, and David A. Rozak ; 13. NanoSIP: nanoSIMS applications for microbial biology / Jennifer Pett-Ridge and Peter K. Weber -- Pt. VI. Kinetic modeling of cellular processes - 14. Electrophysiological-metabolic modeling of microbes: applications in fuel cells and environment analysis / Max Fontus and Peter Ortoleva ; 15. Simulating microbial systems: addressing model uncertainty/incompleteness via multiscale and entropy methods / A. Singharoy, H. Joshi, S.Cheluvaraja, Y. Miao, D. Brown, and P. Ortoleva -- Pt. VII. - 16. Bacterial genome annotation / Nicholas Beckloff, Shawn Starkenburg, Tracey Freitas, and Patrick Chain ; 17. LeishCyc: a guide to building a metabolic pathway database and visualization of metabolomic data / Eleanor C. Saunders, James I. MacRae, Thomas Naderer, Milica Ng, Malcolm J. McConville, and Vladimir A. Likić ; 18. Development of constraint-based system-level models of microbial metabolism / Ali Navid ; 19. Complex network analysis in microbial systems: theory and examples / Zahra Zavareh and Eivind Almaas ; 20. Modeling a minimal cell / Michael L. Shuler, Patricia Foley, and Jordan Atlas
Control code
OCM1bookssj0000697549
Dimensions
26 cm.
Dimensions
unknown
Extent
xii, 615 pages
Isbn
9781617798269
Isbn Type
(acid-free paper)
Lccn
2012937211
Other physical details
illustrations (some color)
Specific material designation
remote
System control number
(WaSeSS)ssj0000697549

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