Coverart for item
The Resource Plant reverse genetics : methods and protocols, edited by Andy Pereira

Plant reverse genetics : methods and protocols, edited by Andy Pereira

Label
Plant reverse genetics : methods and protocols
Title
Plant reverse genetics
Title remainder
methods and protocols
Statement of responsibility
edited by Andy Pereira
Contributor
Subject
Genre
Language
eng
Summary
After the generation of genome sequence data from a wide variety of plants, databases are filled with sequence information of genes with no known biological function, and while bioinformatics tools can help analyze genome sequences and predict gene structures, experimental approaches to discover gene functions need to be widely implemented. In Plant Reverse Genetics: Methods and Protocols, leading researchers in the field describe cutting-edge methods, both high-throughput and genome-wide, involving the models Arabidopsis and rice as well as several other plants to provide comparative functional genomics information. With chapters on the analysis of high-throughput genome sequence data, the identification of non-coding RNA from sequence information, the comprehensive analysis of gene expression by microarrays, and metabolomic analysis, the thorough methods of the book are fully supported by scripts to aid their computational use. Written in the highly successful Methods in Molecular Biology series format, the chapters contain introductions to their respective topics, lists of the necessary materials, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and essential, Plant Reverse Genetics: Methods and Protocols is an ideal guide for researchers seeking an understanding of how the complex web of plant genes work together in a systems biology view
Member of
Cataloging source
SCB
Dewey number
572.862
Illustrations
illustrations
Index
index present
Language note
English
LC call number
QK981
Literary form
non fiction
NAL call number
QK981.4
NAL item number
.P58 2011
Nature of contents
  • dictionaries
  • bibliography
  • encyclopedias
http://library.link/vocab/relatedWorkOrContributorName
Pereira, Andy
Series statement
  • Methods in molecular biology,
  • Springer protocols
Series volume
678
http://library.link/vocab/subjectName
  • Plant genomes
  • Genes
  • Databases, Genetic
  • Publication Formats
  • Genetic Techniques
  • Biology
  • Genome
  • Eukaryota
  • Biological Science Disciplines
  • Databases, Factual
  • Genome Components
  • Investigative Techniques
  • Genetic Structures
  • Organisms
  • Publication Characteristics
  • Genes, Plant
  • Laboratory Manuals
  • Sequence Analysis
  • Genome, Plant
  • Plants
  • Databases, Nucleic Acid
  • Databases as Topic
  • Genetic Phenomena
  • Natural Science Disciplines
  • Disciplines and Occupations
  • Phenomena and Processes
  • Information Storage and Retrieval
  • Information Systems
  • Medical Informatics Applications
  • Information Science
  • Medical Informatics
  • Genetics
  • Botany
  • Life sciences
  • Medical genetics
  • Plant breeding
Label
Plant reverse genetics : methods and protocols, edited by Andy Pereira
Instantiates
Publication
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Analysis of high-throughput sequencing data / S.P. Mane, T. Modise and B.W. Sobral -- Identification of plant microRNAs using expressed sequence tag analysis / T.P. Frazier and B. Zhang -- Microarray data analysis / S.K. Mohapatra and A. Krishnan -- Setting up reverse transcription quantitative-PCR experiments / M.M. Ambavaram and A. Pereira -- Virus-induced gene silencing in Nicotiana benthamiana and other plant species / A. Hayward, M. Padmanabhan and S.P. Dinesh-Kumar -- Agroinoculation and agroinfiltration: Simple tools for complex gene function analyses / Z. Vaghchhipawala [and others] -- Full-length cDNA overexpressor gene hunting system (FOX hunting system) / M. Higuchi [and others] -- Activation tagging with En/Spm-i /dSpm transposons in Arabidopsis / N. Marsch-Martinez and A. Pereira -- Activation tagging and insertional mutagenesis in barley / M.A. Ayliffe and A.J. Pryor -- Methods for rice phenomics studies / C.G. Chern [and others] -- Development of an efficient inverse PCR method for isolating gene tags from T-DNA insertional mutants in rice / S.R. Kim, J.S. Jeon and G. An -- Transposon insertional mutagenesis in rice / N.M. Upadhyaya, Q.H. Zhu and R.S. Bhat -- Reverse genetics in Medicago truncatula using Tnt1 insertion mutants / X. Cheng [and others] -- Screening Arabidopsis genotypes for drought stress resistance / A. Harb and A. Pereira -- Protein tagging for chromatin immunoprecipitation from Arabidopsis / S. de Folter -- Yeast one-hybrid screens for detection of transcription factor DNA interactions / P.B. Ouwerkerk and A.H. Meijer -- Plant metabolomics by GC-MS and differential analysis / J.L. Shuman [and others] -- Gramene database: A hub for comparative plant genomics / P. Jaiswal
Control code
671273119
Dimensions
unknown
Extent
1 online resource (xi, 282 pages)
Form of item
online
Isbn
9781607616825
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-1-60761-682-5
Other physical details
illustrations.
http://library.link/vocab/ext/overdrive/overdriveId
978-1-60761-681-8
Specific material designation
remote
System control number
(OCoLC)671273119
Label
Plant reverse genetics : methods and protocols, edited by Andy Pereira
Publication
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Analysis of high-throughput sequencing data / S.P. Mane, T. Modise and B.W. Sobral -- Identification of plant microRNAs using expressed sequence tag analysis / T.P. Frazier and B. Zhang -- Microarray data analysis / S.K. Mohapatra and A. Krishnan -- Setting up reverse transcription quantitative-PCR experiments / M.M. Ambavaram and A. Pereira -- Virus-induced gene silencing in Nicotiana benthamiana and other plant species / A. Hayward, M. Padmanabhan and S.P. Dinesh-Kumar -- Agroinoculation and agroinfiltration: Simple tools for complex gene function analyses / Z. Vaghchhipawala [and others] -- Full-length cDNA overexpressor gene hunting system (FOX hunting system) / M. Higuchi [and others] -- Activation tagging with En/Spm-i /dSpm transposons in Arabidopsis / N. Marsch-Martinez and A. Pereira -- Activation tagging and insertional mutagenesis in barley / M.A. Ayliffe and A.J. Pryor -- Methods for rice phenomics studies / C.G. Chern [and others] -- Development of an efficient inverse PCR method for isolating gene tags from T-DNA insertional mutants in rice / S.R. Kim, J.S. Jeon and G. An -- Transposon insertional mutagenesis in rice / N.M. Upadhyaya, Q.H. Zhu and R.S. Bhat -- Reverse genetics in Medicago truncatula using Tnt1 insertion mutants / X. Cheng [and others] -- Screening Arabidopsis genotypes for drought stress resistance / A. Harb and A. Pereira -- Protein tagging for chromatin immunoprecipitation from Arabidopsis / S. de Folter -- Yeast one-hybrid screens for detection of transcription factor DNA interactions / P.B. Ouwerkerk and A.H. Meijer -- Plant metabolomics by GC-MS and differential analysis / J.L. Shuman [and others] -- Gramene database: A hub for comparative plant genomics / P. Jaiswal
Control code
671273119
Dimensions
unknown
Extent
1 online resource (xi, 282 pages)
Form of item
online
Isbn
9781607616825
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-1-60761-682-5
Other physical details
illustrations.
http://library.link/vocab/ext/overdrive/overdriveId
978-1-60761-681-8
Specific material designation
remote
System control number
(OCoLC)671273119

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      38.944491 -92.326012
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