Coverart for item
The Resource Plant transposable elements : methods and protocols, edited by Thomas Peterson

Plant transposable elements : methods and protocols, edited by Thomas Peterson

Label
Plant transposable elements : methods and protocols
Title
Plant transposable elements
Title remainder
methods and protocols
Statement of responsibility
edited by Thomas Peterson
Contributor
Copyright holder
Editor
Subject
Genre
Language
eng
Summary
"Transposable elements have played a major role in shaping plant genome structure and gene expression. Transposons not only drive sequence expansion, induce mutations and generate chromosome rearrangements, they also help to shape the epigenetic topology of the eukaryotic genome. In Plant Transposable Elements: Methods and Protocols, expert researchers in the field detail many of the methods which are now commonly used to study transposons. These methods include computational approaches to study the ancient transposon remnants that comprise the bulk of plant genomes, as well as laboratory techniques to identify recent and ongoing transposition events." --
Member of
Assigning source
Publisher website
Cataloging source
BTCTA
Illustrations
illustrations
Index
index present
LC call number
QK981.4
LC item number
P7139 2013
Literary form
non fiction
Nature of contents
bibliography
http://library.link/vocab/relatedWorkOrContributorDate
1955-
http://library.link/vocab/relatedWorkOrContributorName
  • Peterson, Thomas
  • Springer Science+Business Media
Series statement
  • Methods in molecular biology,
  • Springer protocols,
Series volume
1057
http://library.link/vocab/subjectName
  • Transposons
  • Plant genetic transformation
  • DNA Transposable Elements
  • Genome, Plant
  • Genome, Plant
Label
Plant transposable elements : methods and protocols, edited by Thomas Peterson
Instantiates
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
volume
Carrier category code
  • nc
Carrier MARC source
rdacarrier.
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent.
Contents
1. Historical overview of transposable element research / Peter A. Peterson -- 2. Distinguishing variable phenotypes from variegation caused by transposon activities / Virginia Walbot -- 3. Using transposons for genetic mosaic analysis of plant development / Philip W. Becraft -- 4. Survey of natural and transgenic gene markers used to monitor transposon activity / Lakshminarasimhan Krishnaswamy and Thomas Peterson -- 5. Molecular biology of maize Ac/Ds elements: an overview / Katina Lazarow, My-Linh Doll and Reinhard Kunze -- 6. Gene tagging with engineered Ds elements in maize / Yubin Li, Gregorio Segal, Quinghua Wang and Hugo K. Donner -- 7. Plant regeneration methods for rapid generation of a large scale Ds transposant population in rice / Yuan Hu Xuan, Jin Huang, Gihwan Yi, Don-Soo Park, Soo Kwon Park, Moo Young Eun, Dob Won Yun, Gang-Seob Lee, Tae Ho Kim and Chang-deok Han -- 8. Isolation of sequences flanking Ac insertion sites by Ac casting / Dafang Wang and Thomas Peterson -- 9. Regulation of the mutator system of transposons in maize / Damon Lisch -- 10. Using MuDR/Mu transposons in directed tagging strategies / Virginia Walbot and Julia Qüesta -- 11. Genetic and molecular analyses of UniformMu transposon insertion lines / Donald R. McCarty, Masaharu Suzuki, Charles Hunter, Joseph Collins, Wayne T. Avigne, Karen E. Koch -- 12. Digestion-ligation-amplification (DLA): a simple genome walking method to amplify unknown sequences flanking mutator (Mu) transposons and thereby facilitate gene cloning / Sanzhen Liu, An-Ping Hsia and Patrick S. Schnable -- 13. Molecular genetics and epigenetics of CACTA elements / Nina V. Fedoroff -- 14. Activation tagging using the maize En-I transposon system for the identification of abiotic stress resistance genes in arabidopsis / Amal Harb and Andy Pereira -- 15. Reverse genetics in rice using Tos17 / Delphine Mieulet, Anne Diévart, Gaëtan Droc, Nadège Lanau and Emmanuel Guiderdoni -- 16. Identification and applications of the Petunia Class II Act1/dTph1 transposable element system / Tom Gerats, Jan Zethof and Michiel Vandenbussche -- 17. Transposon display: a versatile method for transposon tagging / Michiel Vandenbussche, Jan Zethof and Tom Gerats -- 18. Massive indexed parallel identification of transposon flanking sequences / Michiel Vandenbussche, Jan Zethof and Tom Gerats -- 19. Use of next generation sequencing (NGS) technologies for the genome-wide detection of transposition / Moaine Elbaidouri, Cristian Chaparro and Olivier Panaud -- 20. Overview of repeat annotation and de novo repeat identification / Ning Jiang -- 21. Computational methods for identification of DNA transposons / Ning Jiang -- 22. TEnest 2.0: Computational annotation and visualization of nested transposable elements / Brent A. Kronmiller and Roger P. Wise
Control code
841895407
Dimensions
26 cm
Extent
xv, 324 pages
Isbn
9781627035675
Lccn
2013942868
Media category
unmediated
Media MARC source
rdamedia.
Media type code
  • n
Other physical details
illustrations (some color)
System control number
(OCoLC)841895407
Label
Plant transposable elements : methods and protocols, edited by Thomas Peterson
Publication
Copyright
Bibliography note
Includes bibliographical references and index
Carrier category
volume
Carrier category code
  • nc
Carrier MARC source
rdacarrier.
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent.
Contents
1. Historical overview of transposable element research / Peter A. Peterson -- 2. Distinguishing variable phenotypes from variegation caused by transposon activities / Virginia Walbot -- 3. Using transposons for genetic mosaic analysis of plant development / Philip W. Becraft -- 4. Survey of natural and transgenic gene markers used to monitor transposon activity / Lakshminarasimhan Krishnaswamy and Thomas Peterson -- 5. Molecular biology of maize Ac/Ds elements: an overview / Katina Lazarow, My-Linh Doll and Reinhard Kunze -- 6. Gene tagging with engineered Ds elements in maize / Yubin Li, Gregorio Segal, Quinghua Wang and Hugo K. Donner -- 7. Plant regeneration methods for rapid generation of a large scale Ds transposant population in rice / Yuan Hu Xuan, Jin Huang, Gihwan Yi, Don-Soo Park, Soo Kwon Park, Moo Young Eun, Dob Won Yun, Gang-Seob Lee, Tae Ho Kim and Chang-deok Han -- 8. Isolation of sequences flanking Ac insertion sites by Ac casting / Dafang Wang and Thomas Peterson -- 9. Regulation of the mutator system of transposons in maize / Damon Lisch -- 10. Using MuDR/Mu transposons in directed tagging strategies / Virginia Walbot and Julia Qüesta -- 11. Genetic and molecular analyses of UniformMu transposon insertion lines / Donald R. McCarty, Masaharu Suzuki, Charles Hunter, Joseph Collins, Wayne T. Avigne, Karen E. Koch -- 12. Digestion-ligation-amplification (DLA): a simple genome walking method to amplify unknown sequences flanking mutator (Mu) transposons and thereby facilitate gene cloning / Sanzhen Liu, An-Ping Hsia and Patrick S. Schnable -- 13. Molecular genetics and epigenetics of CACTA elements / Nina V. Fedoroff -- 14. Activation tagging using the maize En-I transposon system for the identification of abiotic stress resistance genes in arabidopsis / Amal Harb and Andy Pereira -- 15. Reverse genetics in rice using Tos17 / Delphine Mieulet, Anne Diévart, Gaëtan Droc, Nadège Lanau and Emmanuel Guiderdoni -- 16. Identification and applications of the Petunia Class II Act1/dTph1 transposable element system / Tom Gerats, Jan Zethof and Michiel Vandenbussche -- 17. Transposon display: a versatile method for transposon tagging / Michiel Vandenbussche, Jan Zethof and Tom Gerats -- 18. Massive indexed parallel identification of transposon flanking sequences / Michiel Vandenbussche, Jan Zethof and Tom Gerats -- 19. Use of next generation sequencing (NGS) technologies for the genome-wide detection of transposition / Moaine Elbaidouri, Cristian Chaparro and Olivier Panaud -- 20. Overview of repeat annotation and de novo repeat identification / Ning Jiang -- 21. Computational methods for identification of DNA transposons / Ning Jiang -- 22. TEnest 2.0: Computational annotation and visualization of nested transposable elements / Brent A. Kronmiller and Roger P. Wise
Control code
841895407
Dimensions
26 cm
Extent
xv, 324 pages
Isbn
9781627035675
Lccn
2013942868
Media category
unmediated
Media MARC source
rdamedia.
Media type code
  • n
Other physical details
illustrations (some color)
System control number
(OCoLC)841895407

Library Locations

    • Ellis LibraryBorrow it
      1020 Lowry Street, Columbia, MO, 65201, US
      38.944491 -92.326012
Processing Feedback ...