Coverart for item
The Resource Protein networks and pathway analysis, edited by Yuri Nikolsky and Julie Bryant

Protein networks and pathway analysis, edited by Yuri Nikolsky and Julie Bryant

Label
Protein networks and pathway analysis
Title
Protein networks and pathway analysis
Statement of responsibility
edited by Yuri Nikolsky and Julie Bryant
Contributor
Subject
Genre
Language
eng
Summary
From the beginning of the OMICs biology era, science has been pursuing the reduction of the complex "genome-wide" assays in order to understand the essential biology that lies beneath it. In Protein Networks and Pathway Analysis, expert practitioners present a compilation of methods of functional data analysis, often referred to as "systems biology," and its applications in drug discovery, medicine and basic disease research. The volume is divided into three convenient sections, covering the elucidation of protein, compound and gene interactions, analytical tools, including networks, interactome and ontologies, and applications of functional analysis. As a volume in the highly successful Methods in Molecular Biology{u2122} series, this work provides detailed descriptions and hands-on implementation advice. Authoritative and cutting-edge, Protein Networks and Pathway Analysis presents both "wet lab" experimental methods and computational tools in order to cover a broad spectrum of issues in this fascinating new field
Member of
Cataloging source
CUS
Dewey number
572.6
Illustrations
illustrations
Index
index present
LC call number
QP551.5
Literary form
non fiction
Nature of contents
  • dictionaries
  • bibliography
NLM call number
QU 55
http://library.link/vocab/relatedWorkOrContributorName
  • Nikolsky, Yuri
  • Bryant, Julie
Series statement
  • Springer protocols
  • Methods in molecular biology
Series volume
563
http://library.link/vocab/subjectName
  • Protein-protein interactions
  • Proteins
  • Protein Interaction Mapping
  • Gene Regulatory Networks
  • Signal Transduction
  • Protein-protein interactions
Label
Protein networks and pathway analysis, edited by Yuri Nikolsky and Julie Bryant
Instantiates
Publication
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Mining protein-protein interactions from published literature using linguamatics I2E / J. Bandy, D. Milward and S. McQuay -- Relative avidity, specificity, and sensitivity of transcription factor-DNA binding in genome-scale experiments / V.A. Kuznetsov -- Curation of inhibitor-target data: Process and impact on pathway analysis / S. Devidas -- Profiling protein interaction networks with functional protein microarrays / D.R. Mattoon and B. Schweitzer -- Manual annotation of protein interactions / S. Bureeva [and others] -- Gene set enrichment analysis / C.A. Tilford and N.O. Siemers -- PANTHER pathway: An ontology-based pathway database coupled with data analysis tools / H. Mi and P. Thomas -- Prioritizing genes for pathway impact using network analysis / A.N. Chang -- Discovering biological networks from diverse functional genomic data / C.L. Myers, C. Chiriac and O.G. Troyanskaya -- Functional analysis of OMICS data and small molecule compounds in an integrated "knowledge-based" platform / Y. Nikolsky [and others] -- Kinetic modeling as a tool to integrate multilevel dynamic experimental data / E. Mogilevskaya [and others] -- Cytoscape: A community-based framework for network modeling / S. Killcoyne [and others] -- Semantic data integration and knowledge management to represent biological network associations / S. Losko and K. Heumann -- Solutions for complex, multi data type and multi tool analysis: Principles and applications of using workflow and pipelining methods / R.E. Munro and Y. Guo -- High-throughput siRNA screening as a method of perturbation of biological systems and identification of targeted pathways coupled with compound screening / J. Kiefer [and others] -- Pathway and network analysis with high-density allelic association data / A. Torkamani and N.J. Schork -- Mirnas: From biogenesis to networks / G. Russo and A. Giordano -- MetaMiner (CF): A disease-oriented bioinformatics analysis environment / J.M. Wright [and others] -- Translational research and biomedical informatics / M. Liebman -- Arraytrack: An FDA and public genomic tool / H. Fang [and others] -- Protein networks and pathway analysis. Preface / Y. Nikolsky and J. Bryant
Control code
436096116
Dimensions
unknown
Extent
1 online resource (xiii, 410 pages)
Form of item
online
Isbn
9781607611752
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other physical details
color illustrations.
Sound
unknown sound
Specific material designation
remote
System control number
(OCoLC)436096116
Label
Protein networks and pathway analysis, edited by Yuri Nikolsky and Julie Bryant
Publication
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Mining protein-protein interactions from published literature using linguamatics I2E / J. Bandy, D. Milward and S. McQuay -- Relative avidity, specificity, and sensitivity of transcription factor-DNA binding in genome-scale experiments / V.A. Kuznetsov -- Curation of inhibitor-target data: Process and impact on pathway analysis / S. Devidas -- Profiling protein interaction networks with functional protein microarrays / D.R. Mattoon and B. Schweitzer -- Manual annotation of protein interactions / S. Bureeva [and others] -- Gene set enrichment analysis / C.A. Tilford and N.O. Siemers -- PANTHER pathway: An ontology-based pathway database coupled with data analysis tools / H. Mi and P. Thomas -- Prioritizing genes for pathway impact using network analysis / A.N. Chang -- Discovering biological networks from diverse functional genomic data / C.L. Myers, C. Chiriac and O.G. Troyanskaya -- Functional analysis of OMICS data and small molecule compounds in an integrated "knowledge-based" platform / Y. Nikolsky [and others] -- Kinetic modeling as a tool to integrate multilevel dynamic experimental data / E. Mogilevskaya [and others] -- Cytoscape: A community-based framework for network modeling / S. Killcoyne [and others] -- Semantic data integration and knowledge management to represent biological network associations / S. Losko and K. Heumann -- Solutions for complex, multi data type and multi tool analysis: Principles and applications of using workflow and pipelining methods / R.E. Munro and Y. Guo -- High-throughput siRNA screening as a method of perturbation of biological systems and identification of targeted pathways coupled with compound screening / J. Kiefer [and others] -- Pathway and network analysis with high-density allelic association data / A. Torkamani and N.J. Schork -- Mirnas: From biogenesis to networks / G. Russo and A. Giordano -- MetaMiner (CF): A disease-oriented bioinformatics analysis environment / J.M. Wright [and others] -- Translational research and biomedical informatics / M. Liebman -- Arraytrack: An FDA and public genomic tool / H. Fang [and others] -- Protein networks and pathway analysis. Preface / Y. Nikolsky and J. Bryant
Control code
436096116
Dimensions
unknown
Extent
1 online resource (xiii, 410 pages)
Form of item
online
Isbn
9781607611752
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other physical details
color illustrations.
Sound
unknown sound
Specific material designation
remote
System control number
(OCoLC)436096116

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