Coverart for item
The Resource RNA sequence, structure, and function : computational and bioinformatic methods, edited by Jan Gorodkin, Walter L. Ruzzo

RNA sequence, structure, and function : computational and bioinformatic methods, edited by Jan Gorodkin, Walter L. Ruzzo

Label
RNA sequence, structure, and function : computational and bioinformatic methods
Title
RNA sequence, structure, and function
Title remainder
computational and bioinformatic methods
Statement of responsibility
edited by Jan Gorodkin, Walter L. Ruzzo
Contributor
Editor
Subject
Language
eng
Summary
The existence of genes for RNA molecules not coding for proteins (ncRNAs) has been recognized since the 1950's, but until recently, aside from the critically important ribosomal and transfer RNA genes, most focus has been on protein coding genes. However, a long series of striking discoveries, from RNA's ability to carry out catalytic function, to discovery of riboswitches, microRNAs and other ribo-regulators performing critical tasks in essentially all living organisms, has created a burgeoning interest in this primordial component of the biosphere. However, the structural characteristics and evolutionary constraints on RNA molecules are very different from those of proteins, necessitating development of a completely new suite of informatic tools to address these challenges. In RNA Sequence, Structure, Function: Computational and Bioinformatic Methods, expert researchers in the field describe a substantial and relevant fraction of these methodologies from both practical and computational/algorithmic perspectives. Focusing on both of these directions addresses both the biologist interested in knowing more about RNA bioinformatics as well as the bioinformaticist interested in more detailed aspects of the algorithms. Written in the highly successful Methods in Molecular Biology series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results. Thorough and intuitive, RNA Sequence, Structure, Function: Computational and Bioinformatic Methods aids scientists in continuing to study key methods and principles of RNA bioinformatics
Member of
Cataloging source
GW5XE
Dewey number
572.88
Illustrations
illustrations
Index
index present
Language note
English
LC call number
QP623
Literary form
non fiction
NAL call number
QP623
NAL item number
.R54 2014
Nature of contents
  • dictionaries
  • bibliography
NLM call number
  • W1
  • QU 58.7
NLM item number
ME9616J v.1097 2014
http://library.link/vocab/relatedWorkOrContributorName
  • Gorodkin, Jan
  • Ruzzo, Walter L.
Series statement
Methods in molecular biology,
Series volume
1097
http://library.link/vocab/subjectName
  • RNA
  • Nucleotide sequence
  • Molecular Conformation
  • Natural Science Disciplines
  • Investigative Techniques
  • Nucleic Acids
  • Sequence Analysis
  • Biology
  • Genetic Structures
  • Genetic Techniques
  • Nucleic Acids, Nucleotides, and Nucleosides
  • Genetic Phenomena
  • Biological Science Disciplines
  • Molecular Structure
  • Disciplines and Occupations
  • Phenomena and Processes
  • Biochemical Phenomena
  • Chemical Phenomena
  • Nucleic Acid Conformation
  • Computational Biology
  • Sequence Analysis, RNA
  • RNA
  • Chemistry
  • Methods
  • Institut für Ressourcenschonende und Nachhaltige Systeme
  • Nucleotide sequence
  • RNA
  • Bioinformatik
  • Methode
Label
RNA sequence, structure, and function : computational and bioinformatic methods, edited by Jan Gorodkin, Walter L. Ruzzo
Instantiates
Publication
Copyright
Antecedent source
unknown
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • Annotating Functional RNAs in Genomes using Infernal
  • Class-specific Prediction of ncRNAs
  • Abstract Shape Analysis of RNA
  • Introduction to RNA Secondary Structure Comparison
  • RNA Structural Alignments, Part I: Sankoff Based Approaches for Structural Alignments
  • RNA Structural Alignments, Part II: Non-Sankoff Approaches for Structural Alignments
  • De novo Discovery of Structured ncRNA Motifs in Genomic Sequences., -- Phylogeny and Evolution of RNA Structure
  • The Art of Editing RNA Structural Alignments
  • Automated Modeling of RNA 3D Structure
  • Computational Prediction of RNA-RNA Interactions
  • Concepts and Introduction to RNA Bioinformatics
  • Computational Prediction of microRNA Genes
  • MicroRNA Target Finding by Comparative Genomics
  • Bioinformatics of siRNA Design
  • RNA-protein Interactions: An Overview
  • The Principles of RNA Structure Architecture
  • The Determination of RNA Folding Nearest Neighbor Parameters
  • Energy Directed RNA Structure Prediction
  • Introduction to Stochastic Context Free Grammars
  • An Introduction to RNA Databases
  • Energy-based RNA Consensus Secondary Structure Prediction in Multiple Sequence Alignments
  • SCFGs in RNA Secondary Structure Prediction: A Hands-on Approach
Control code
875906350
Dimensions
unknown
Extent
1 online resource (xi, 533 pages)
File format
unknown
Form of item
online
Isbn
9781627037082
Level of compression
unknown
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-1-62703-709-9
Other physical details
illustrations (chiefly black and white).
Quality assurance targets
not applicable
Reformatting quality
unknown
Sound
unknown sound
Specific material designation
remote
System control number
(OCoLC)875906350
Label
RNA sequence, structure, and function : computational and bioinformatic methods, edited by Jan Gorodkin, Walter L. Ruzzo
Publication
Copyright
Antecedent source
unknown
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
  • Annotating Functional RNAs in Genomes using Infernal
  • Class-specific Prediction of ncRNAs
  • Abstract Shape Analysis of RNA
  • Introduction to RNA Secondary Structure Comparison
  • RNA Structural Alignments, Part I: Sankoff Based Approaches for Structural Alignments
  • RNA Structural Alignments, Part II: Non-Sankoff Approaches for Structural Alignments
  • De novo Discovery of Structured ncRNA Motifs in Genomic Sequences., -- Phylogeny and Evolution of RNA Structure
  • The Art of Editing RNA Structural Alignments
  • Automated Modeling of RNA 3D Structure
  • Computational Prediction of RNA-RNA Interactions
  • Concepts and Introduction to RNA Bioinformatics
  • Computational Prediction of microRNA Genes
  • MicroRNA Target Finding by Comparative Genomics
  • Bioinformatics of siRNA Design
  • RNA-protein Interactions: An Overview
  • The Principles of RNA Structure Architecture
  • The Determination of RNA Folding Nearest Neighbor Parameters
  • Energy Directed RNA Structure Prediction
  • Introduction to Stochastic Context Free Grammars
  • An Introduction to RNA Databases
  • Energy-based RNA Consensus Secondary Structure Prediction in Multiple Sequence Alignments
  • SCFGs in RNA Secondary Structure Prediction: A Hands-on Approach
Control code
875906350
Dimensions
unknown
Extent
1 online resource (xi, 533 pages)
File format
unknown
Form of item
online
Isbn
9781627037082
Level of compression
unknown
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-1-62703-709-9
Other physical details
illustrations (chiefly black and white).
Quality assurance targets
not applicable
Reformatting quality
unknown
Sound
unknown sound
Specific material designation
remote
System control number
(OCoLC)875906350

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