Coverart for item
The Resource Ribozyme protocols, edited by Philip C. Turner

Ribozyme protocols, edited by Philip C. Turner

Label
Ribozyme protocols
Title
Ribozyme protocols
Statement of responsibility
edited by Philip C. Turner
Contributor
Subject
Genre
Language
eng
Summary
Ribozyme Protocols brings together a broad spectrum of essential and easily reproducible techniques currently used by leading researchers to manipulate RNA molecules and to inactivate gene expression in vivo. The methods collected here range from theoretical design to clinical application and include the synthesis and assay of ribozymes, as well as their use both in vitro and in vivo. Each method is presented by an expert with substantial hands-on experience and in far greater detail than is generally to be found in the research literature. Ribozyme Protocols will help all investigators perform meaningful and successful experiments using ribozymes in both clinical and basic research, as well as launch fresh application initiatives. It is certain to be found indispensable not only by those workers new to the field, but also by experienced researchers who wish to expand their range of expertise
Member of
Is part of
Action
digitized
Cataloging source
YUS
Dewey number
572/.788
Illustrations
illustrations
Index
index present
LC call number
QP623.5.C36
LC item number
R53 1997
Literary form
non fiction
NAL call number
QH506.M45
NAL item number
v.74
Nature of contents
  • dictionaries
  • bibliography
NLM call number
  • W1 ME9616J v.74 1997
  • QU 58.7 R4865 1997
http://library.link/vocab/relatedWorkOrContributorName
Turner, Philip C
Series statement
Methods in molecular biology
Series volume
v. 74
http://library.link/vocab/subjectName
  • Catalytic RNA
  • RNA, Catalytic
  • Genetic Techniques
  • Catalytic RNA
  • Ribozymes
  • Wetenschappelijke technieken
  • Ribozym
  • Methode
  • Aufsatzsammlung
Label
Ribozyme protocols, edited by Philip C. Turner
Instantiates
Publication
Note
Source of title; title from title screen
Antecedent source
unknown
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Ribozymes : an introduction / Helen A. James, Philip C. Turner -- Computer-aided calculation of the local folding potential of target RNA and its use for ribozyme design / Georg Sczakiel, Martin Tabler -- Computational approaches to the identification of ribozyme target sites / William James, Elizabeth Cowe -- Computer analysis of the conservation and uniqueness of ribozyme-targeted HIV sequences / Mary Beth Young, Arnold Hampel -- Selection of accessible sites for ribozymes on large RNA transcripts / Bruce L. Frank, John Goodchild -- Selection of efficient ribozyme cleavage sites in target RNAs / Andre Lieber, Mikkel Rohde, Michael Strauss -- Chemical synthesis, analysis, and purification of ribozymes / Ravi Vinayak -- A practical method for the production of RNA and ribozymes / Francine E. Wincott, Nassim Usman -- Preparation of templates for production of ribozymes and substrates / Rajesh K. Gaur, Guido Krupp -- Enzymatic synthesis and characterization of unmodified ribozymes and substrates / Guido Krupp -- T7 transcript length determination using enzymatic RNA sequencing / Andrew Siwkowski -- Chemical and enzymatic approaches to construct modified RNAs / Rajesh K. Gaur, Guido Krupp -- Applications of modified transcripts / Rajesh K. Gaur, Frank Conrad, Guido Krupp -- Cloning strategies for catalytic antisense RNAs / Martin Tabler, Mina Tsagris -- PCR-based construction of long hammerhead ribozymes / Martin Zillmann, Gregory Robinson -- Design and production of asymmetric hammerhead ribozymes / Martin Tabler, Georg Sczakiel -- Minimized hammerhead ribozymes / Maxine J. McCall, Philip Hendry, Trevor J. Lockett -- Design of hairpin ribozymes for in vitro and cellular applications / Qiao Yu, John M. Burke -- Design of the hairpin ribozyme for targeting specific RNA sequences / Arnold Hampel, Mary Beth Young, Scott Galasinski, Andrew Siwkowski -- Design and preparation of sequence-specific RNase P ribozymes / Denis Drainas, Guido Krupp -- Theoretical considerations in measuring reaction parameters / Timothy S. McConnell -- Experimental approaches for measuring reaction parameters / Timothy S. McConnell -- Determination of catalytic parameters for hairpin ribozymes / Mary Beth Young, Andrew Siwkowski, Arnold Hampel -- Characterizing ribozyme cleavage reactions / Philip Hendry, Maxine J. McCall, Trevor J. Lockett -- Defining optimum reaction conditions for hammerhead ribozymes / Philip Hendry, Maxine J. McCall, Trevor J. Lockett -- Using fluorescence resonance energy transfer to investigate hammerhead ribozyme kinetics / Thomas A. Perkins, John Goodchild -- Design of hybridizing arms in hammerhead ribozymes / Philip Hendry, Maxine J. McCall, Trevor J. Lockett -- Optimization of hammerhead flanking sequences using oligonucleotide facilitators / John Goodchild -- Enhancement of ribozyme function by RNA binding proteins / Nan Sook Lee, Edouard Bertrand, John J. Rossi -- Selection of fast-hybridizing complementary RNA species in vitro / Ralf Kronenwett, Georg Sczakiel -- In vitro selection of hairpin ribozymes / Bruno Sargueil, John M. Burke -- The detection of hammerhead ribozyme cleavage by RT-PCR methods / Rhonda Perriman -- Detection of ribozyme cleavage products using reverse ligation-mediated PCR (RL-PCR) / Edouard Bertrand, Micheline Fromont-Racine, Raymond Pictet, Thierry Grange -- Quantitation of ribozyme target abundance by QCPCR / Amber A. Beaudry, James A. McSwiggen -- Trans-splicing reactions by ribozymes / Joshua T. Jones, Seong-Wook Lee, Bruce A. Sullenger -- Ligation of RNA molecules by the hairpin ribozyme / Alfredo Bertal-Herranz, John M. Burke -- Mutagenesis and modeling of the hairpin ribozyme family / Andrew Siwkowski, Mary Beth DeYoung, Pamela Anderson, Arnold Hampel -- Preparation of homogeneous ribozyme RNA for crystallization / Jennifer A. Doudna -- Establishing suitability of RNA preparations for crystallization : determination of polydispersity / Adrian R. Ferré-d'Amaré, Jennifer A. Doudna -- A sparse matrix approach to crystallizing ribozymes and RNA motifs / Jamie H. Cate, Jennifer A. Doudna -- Crystallographic analyses of chemically synthesized modified hammerhead RNA sequences as a general approach toward understanding ribozyme structure and function / William G. Scott -- tRNA delivery systems for ribozymes / Rhonda Perriman, Rob de Feyter -- Expressing ribozymes in plants / Rob de Feyter, Judith Gaudron -- Using microinjection of Xenopus oocytes to express and optimize ribozymes in vivo / Philip C. Turner -- Exogenous cellular delivery of ribozymes and ribozyme encoding DNAs / Daniela Castanotto, Edouard Bertrand, John Rossi -- Optimization of lipid-mediated ribozyme delivery to cells in culture / Suzy A. Brown, Thale C. Jarvis -- Retroviral delivery and anti-HIV testing of hammerhead ribozymes / Laurence Cagnon, John Rossi -- Hairpin ribozyme gene therapy for AIDS / Elizabeth A. Duarte, Mark C. Leavitt, Osamu Yamada, Mang Yu -- Clinical aspects of ribozymes as therapeutics in gene therapy / David Looney, Mang Yu
Control code
55684315
Dimensions
unknown
Extent
1 online resource (xiv, 492 pages)
File format
unknown
Form of item
online
Isbn
9780896033894
Level of compression
unknown
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other physical details
illustrations.
Quality assurance targets
unknown
Reformatting quality
unknown
Reproduction note
Electronic reproduction.
Sound
unknown sound
Specific material designation
remote
System control number
(OCoLC)55684315
System details
Master and use copy. Digital master created according to Benchmark for Faithful Digital Reproductions of Monographs and Serials, Version 1. Digital Library Federation, December 2002.
Label
Ribozyme protocols, edited by Philip C. Turner
Publication
Note
Source of title; title from title screen
Antecedent source
unknown
Bibliography note
Includes bibliographical references and index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Color
multicolored
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Ribozymes : an introduction / Helen A. James, Philip C. Turner -- Computer-aided calculation of the local folding potential of target RNA and its use for ribozyme design / Georg Sczakiel, Martin Tabler -- Computational approaches to the identification of ribozyme target sites / William James, Elizabeth Cowe -- Computer analysis of the conservation and uniqueness of ribozyme-targeted HIV sequences / Mary Beth Young, Arnold Hampel -- Selection of accessible sites for ribozymes on large RNA transcripts / Bruce L. Frank, John Goodchild -- Selection of efficient ribozyme cleavage sites in target RNAs / Andre Lieber, Mikkel Rohde, Michael Strauss -- Chemical synthesis, analysis, and purification of ribozymes / Ravi Vinayak -- A practical method for the production of RNA and ribozymes / Francine E. Wincott, Nassim Usman -- Preparation of templates for production of ribozymes and substrates / Rajesh K. Gaur, Guido Krupp -- Enzymatic synthesis and characterization of unmodified ribozymes and substrates / Guido Krupp -- T7 transcript length determination using enzymatic RNA sequencing / Andrew Siwkowski -- Chemical and enzymatic approaches to construct modified RNAs / Rajesh K. Gaur, Guido Krupp -- Applications of modified transcripts / Rajesh K. Gaur, Frank Conrad, Guido Krupp -- Cloning strategies for catalytic antisense RNAs / Martin Tabler, Mina Tsagris -- PCR-based construction of long hammerhead ribozymes / Martin Zillmann, Gregory Robinson -- Design and production of asymmetric hammerhead ribozymes / Martin Tabler, Georg Sczakiel -- Minimized hammerhead ribozymes / Maxine J. McCall, Philip Hendry, Trevor J. Lockett -- Design of hairpin ribozymes for in vitro and cellular applications / Qiao Yu, John M. Burke -- Design of the hairpin ribozyme for targeting specific RNA sequences / Arnold Hampel, Mary Beth Young, Scott Galasinski, Andrew Siwkowski -- Design and preparation of sequence-specific RNase P ribozymes / Denis Drainas, Guido Krupp -- Theoretical considerations in measuring reaction parameters / Timothy S. McConnell -- Experimental approaches for measuring reaction parameters / Timothy S. McConnell -- Determination of catalytic parameters for hairpin ribozymes / Mary Beth Young, Andrew Siwkowski, Arnold Hampel -- Characterizing ribozyme cleavage reactions / Philip Hendry, Maxine J. McCall, Trevor J. Lockett -- Defining optimum reaction conditions for hammerhead ribozymes / Philip Hendry, Maxine J. McCall, Trevor J. Lockett -- Using fluorescence resonance energy transfer to investigate hammerhead ribozyme kinetics / Thomas A. Perkins, John Goodchild -- Design of hybridizing arms in hammerhead ribozymes / Philip Hendry, Maxine J. McCall, Trevor J. Lockett -- Optimization of hammerhead flanking sequences using oligonucleotide facilitators / John Goodchild -- Enhancement of ribozyme function by RNA binding proteins / Nan Sook Lee, Edouard Bertrand, John J. Rossi -- Selection of fast-hybridizing complementary RNA species in vitro / Ralf Kronenwett, Georg Sczakiel -- In vitro selection of hairpin ribozymes / Bruno Sargueil, John M. Burke -- The detection of hammerhead ribozyme cleavage by RT-PCR methods / Rhonda Perriman -- Detection of ribozyme cleavage products using reverse ligation-mediated PCR (RL-PCR) / Edouard Bertrand, Micheline Fromont-Racine, Raymond Pictet, Thierry Grange -- Quantitation of ribozyme target abundance by QCPCR / Amber A. Beaudry, James A. McSwiggen -- Trans-splicing reactions by ribozymes / Joshua T. Jones, Seong-Wook Lee, Bruce A. Sullenger -- Ligation of RNA molecules by the hairpin ribozyme / Alfredo Bertal-Herranz, John M. Burke -- Mutagenesis and modeling of the hairpin ribozyme family / Andrew Siwkowski, Mary Beth DeYoung, Pamela Anderson, Arnold Hampel -- Preparation of homogeneous ribozyme RNA for crystallization / Jennifer A. Doudna -- Establishing suitability of RNA preparations for crystallization : determination of polydispersity / Adrian R. Ferré-d'Amaré, Jennifer A. Doudna -- A sparse matrix approach to crystallizing ribozymes and RNA motifs / Jamie H. Cate, Jennifer A. Doudna -- Crystallographic analyses of chemically synthesized modified hammerhead RNA sequences as a general approach toward understanding ribozyme structure and function / William G. Scott -- tRNA delivery systems for ribozymes / Rhonda Perriman, Rob de Feyter -- Expressing ribozymes in plants / Rob de Feyter, Judith Gaudron -- Using microinjection of Xenopus oocytes to express and optimize ribozymes in vivo / Philip C. Turner -- Exogenous cellular delivery of ribozymes and ribozyme encoding DNAs / Daniela Castanotto, Edouard Bertrand, John Rossi -- Optimization of lipid-mediated ribozyme delivery to cells in culture / Suzy A. Brown, Thale C. Jarvis -- Retroviral delivery and anti-HIV testing of hammerhead ribozymes / Laurence Cagnon, John Rossi -- Hairpin ribozyme gene therapy for AIDS / Elizabeth A. Duarte, Mark C. Leavitt, Osamu Yamada, Mang Yu -- Clinical aspects of ribozymes as therapeutics in gene therapy / David Looney, Mang Yu
Control code
55684315
Dimensions
unknown
Extent
1 online resource (xiv, 492 pages)
File format
unknown
Form of item
online
Isbn
9780896033894
Level of compression
unknown
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other physical details
illustrations.
Quality assurance targets
unknown
Reformatting quality
unknown
Reproduction note
Electronic reproduction.
Sound
unknown sound
Specific material designation
remote
System control number
(OCoLC)55684315
System details
Master and use copy. Digital master created according to Benchmark for Faithful Digital Reproductions of Monographs and Serials, Version 1. Digital Library Federation, December 2002.

Library Locations

    • Ellis LibraryBorrow it
      1020 Lowry Street, Columbia, MO, 65201, US
      38.944491 -92.326012
Processing Feedback ...